methylseg.SampleInfo

class methylseg.SampleInfo(sample_id, meth_data, resolution=None)[source]

Bases: object

Simple container for sample metadata and prepared methylation rows.

Parameters:

sample_id (str) – Unique sample identifier such as a TCGA barcode.
meth_data (pandas.DataFrame) – DataFrame with canonical methylation columns CpG_chrm, CpG_beg, CpG_end, and beta.
resolution (str | None)

__init__(sample_id, meth_data, resolution=None)

Parameters:

Return type:

None

Methods

__init__(sample_id, meth_data[, resolution])

Attributes