methylseg.MethylationStates

class methylseg.MethylationStates(*values)

Bases: MethylEnum

Canonical biological methylation states used throughout the package.

__init__(*args, **kwds)

Methods

from_string(s)	Parse a string or scalar value into an enum member.
convert_to_numeric(arr)	Convert methylation-state labels into integer codes.

Attributes

LOW
PMD
INTERMEDIATE
HIGH

LOW = 0

PMD = 1

INTERMEDIATE = 2

HIGH = 3

static convert_to_numeric(arr)

Convert methylation-state labels into integer codes.

Parameters:

arr – Array-like of MethylationStates values or already numeric state labels.

Returns:

Integer array suitable for model fitting, serialization, or plotting.

Return type:

numpy.ndarray