methylseg.MethylStateAssigner
=============================

.. currentmodule:: methylseg

.. autoclass:: MethylStateAssigner

   
   .. automethod:: __init__

   
   .. rubric:: Methods

   .. autosummary::
   
      ~MethylStateAssigner.__init__
      ~MethylStateAssigner.apply_kmeans_to_emissions
      ~MethylStateAssigner.apply_kmeans_to_sample
      ~MethylStateAssigner.build_emission_matrix
      ~MethylStateAssigner.calculate_kmeans_cluster_metrics
      ~MethylStateAssigner.fit_kmeans_on_emissions
      ~MethylStateAssigner.get_pca_loadings
      ~MethylStateAssigner.plot_embedding
      ~MethylStateAssigner.plot_feature_distributions_by_kmeans_state
      ~MethylStateAssigner.plot_kmeans_clusters
      ~MethylStateAssigner.plot_labels
      ~MethylStateAssigner.plot_pca_clusters
      ~MethylStateAssigner.plot_pca_clusters_with_region
      ~MethylStateAssigner.plot_train_pca_clusters
      ~MethylStateAssigner.plot_training_embedding
      ~MethylStateAssigner.plot_umap_clusters
      ~MethylStateAssigner.prepare_sample_for_clustering
      ~MethylStateAssigner.preprocess_emission_features
      ~MethylStateAssigner.resolve_feature_cols
      ~MethylStateAssigner.train_kmeans_for_sample