methylseg.MethylStateAnalyzer
=============================

.. currentmodule:: methylseg

.. autoclass:: MethylStateAnalyzer

   
   .. automethod:: __init__

   
   .. rubric:: Methods

   .. autosummary::
   
      ~MethylStateAnalyzer.__init__
      ~MethylStateAnalyzer.define_states_by_rules
      ~MethylStateAnalyzer.define_states_by_rules_param
      ~MethylStateAnalyzer.evaluate_clustering_concordance
      ~MethylStateAnalyzer.evaluate_rules_against_kmeans
      ~MethylStateAnalyzer.optimize_rule_params_random
      ~MethylStateAnalyzer.plot_labels
      ~MethylStateAnalyzer.pretty_print_rules
      ~MethylStateAnalyzer.set_state_cutoffs
      ~MethylStateAnalyzer.set_state_cutoffs_from_yaml